Sciweavers

293 search results - page 5 / 59
» BioDiVinE: A Framework for Parallel Analysis of Biological M...
Sort
View
IWOMP
2007
Springer
14 years 3 months ago
Parallel Data Flow Analysis for OpenMP Programs
The paper presents a compiler framework for analyzing and optimizing OpenMP programs. The framework includes Parallel Control Flow Graph and Parallel Data Flow equations based on t...
Lei Huang, Girija Sethuraman, Barbara M. Chapman
CIKM
2008
Springer
13 years 11 months ago
A system for finding biological entities that satisfy certain conditions from texts
Finding biological entities (such as genes or proteins) that satisfy certain conditions from texts is an important and challenging task in biomedical information retrieval and tex...
Wei Zhou, Clement T. Yu, Weiyi Meng
BMCBI
2005
158views more  BMCBI 2005»
13 years 8 months ago
Automated generation of heuristics for biological sequence comparison
Background: Exhaustive methods of sequence alignment are accurate but slow, whereas heuristic approaches run quickly, but their complexity makes them more difficult to implement. ...
Guy St. C. Slater, Ewan Birney
SYNASC
2005
IEEE
84views Algorithms» more  SYNASC 2005»
14 years 2 months ago
Membrane Computing as a Framework for Modeling Economic Processes
Abstract. This paper is a first step towards a systematic evaluation of the possibilities to use membrane computing as a modeling framework for economics. Membrane computing is a ...
Gheorghe Paun, Radu A. Paun
BMCBI
2010
154views more  BMCBI 2010»
13 years 9 months ago
Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
Background: A major goal of molecular biology is determining the mechanisms that control the transcription of genes. Motif Enrichment Analysis (MEA) seeks to determine which DNA-b...
Robert C. McLeay, Timothy L. Bailey