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IJBRA
2008
97views more  IJBRA 2008»
13 years 7 months ago
Extracting Protein-Protein Interactions from MEDLINE using the Hidden Vector State model
: A major challenge in text mining for biomedicine is automatically extracting protein-protein interactions from the vast amount of biomedical literature. We have constructed an in...
Deyu Zhou, Yulan He, Chee Keong Kwoh
BMCBI
2005
153views more  BMCBI 2005»
13 years 7 months ago
Learning Statistical Models for Annotating Proteins with Function Information using Biomedical Text
Background: The BioCreative text mining evaluation investigated the application of text mining methods to the task of automatically extracting information from text in biomedical ...
Soumya Ray, Mark Craven
BMCBI
2010
98views more  BMCBI 2010»
13 years 7 months ago
Resolving anaphoras for the extraction of drug-drug interactions in pharmacological documents
Background: Drug-drug interactions are frequently reported in the increasing amount of biomedical literature. Information Extraction (IE) techniques have been devised as a useful ...
Isabel Segura-Bedmar, Mario Crespo, César d...
BMCBI
2010
129views more  BMCBI 2010»
13 years 7 months ago
LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships
Background: Biological knowledge is represented in scientific literature that often describes the function of genes/ proteins (bioentities) in terms of their interactions (biointe...
Adriano Barbosa-Silva, Theodoros G. Soldatos, Ivan...
EMNLP
2009
13 years 5 months ago
Unsupervised Semantic Parsing
We present the first unsupervised approach to the problem of learning a semantic parser, using Markov logic. Our USP system transforms dependency trees into quasi-logical forms, r...
Hoifung Poon, Pedro Domingos