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CORR
2010
Springer
174views Education» more  CORR 2010»
13 years 7 months ago
Hybrid Numerical Solution of the Chemical Master Equation
We present a numerical approximation technique for the analysis of continuous-time Markov chains that describe networks of biochemical reactions and play an important role in the ...
Thomas A. Henzinger, Maria Mateescu, Linar Mikeev,...
BIOCOMP
2007
13 years 9 months ago
Interaction Models for Biochemical Reactions
Abstract—This paper presents a stochastic modelling framework for complex biochemical reaction networks from a component-based perspective. Our approach takes into account the di...
Mila E. Majster-Cederbaum, Nils Semmelrock, Verena...
EUROGP
2006
Springer
140views Optimization» more  EUROGP 2006»
13 years 11 months ago
Evolving Noisy Oscillatory Dynamics in Genetic Regulatory Networks
We introduce a genetic programming (GP) approach for evolving genetic networks that demonstrate desired dynamics when simulated as a discrete stochastic process. Our representation...
André Leier, P. Dwight Kuo, Wolfgang Banzha...
ENTCS
2010
119views more  ENTCS 2010»
13 years 7 months ago
Bio-PEPA for Epidemiological Models
Many models have been defined in order to describe the evolution of a disease in a population. The modelling of diseases is helpful to understand the mechanisms for their spread a...
Federica Ciocchetta, Jane Hillston
MMAS
2010
Springer
13 years 2 months ago
Incorporating Active Transport of Cellular Cargo in Stochastic Mesoscopic Models of Living Cells
We propose a new multiscale method to incorporate active transport of cargo particles in biological cells in stochastic, mesoscopic models of reaction-transport processes. Given a...
Andreas Hellander, Per Lötstedt