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BMCBI
2005
98views more  BMCBI 2005»
13 years 9 months ago
The effects of normalization on the correlation structure of microarray data
Background: Stochastic dependence between gene expression levels in microarray data is of critical importance for the methods of statistical inference that resort to pooling test-...
Xing Qiu, Andrew I. Brooks, Lev Klebanov, Andrei Y...
BMCBI
2005
102views more  BMCBI 2005»
13 years 9 months ago
BioCreAtIvE Task1A: entity identification with a stochastic tagger
Background: Our approach to Task 1A was inspired by Tanabe and Wilbur's ABGene system [1,2]. Like Tanabe and Wilbur, we approached the problem as one of part-of-speech taggin...
Shuhei Kinoshita, K. Bretonnel Cohen, Philip V. Og...
ALIFE
2002
13 years 9 months ago
Bioinspired Engineering of Exploration Systems for NASA and DoD
A new approach called bioinspired engineering of exploration systems (BEES) and its value for solving pressing NASA and DoD needs are described. Insects (for example honeybees and ...
Sarita Thakoor, Javaan S. Chahl, Mandyam V. Sriniv...
BMCBI
2004
323views more  BMCBI 2004»
13 years 9 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
BMCBI
2004
130views more  BMCBI 2004»
13 years 9 months ago
PATTERNFINDER: combined analysis of DNA regulatory sequences and double-helix stability
Background: Regulatory regions that function in DNA replication and gene transcription contain specific sequences that bind proteins as well as less-specific sequences in which th...
Yanlin Huang, David Kowalski