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ICTAI
2008
IEEE
14 years 4 months ago
The System BioC for Reasoning about Biological Models in Action Language C
We elaborate upon the usage of action language C for representing and reasoning about biological models. First, we provide a simple extension of C allowing for variables and show ...
Steve Dworschak, Torsten Grote, Arne König, T...
CMSB
2006
Springer
14 years 1 months ago
Type Inference in Systems Biology
Type checking and type inference are important concepts and methods of programming languages and software engineering. Type checking is a way to ensure some level of consistency, d...
François Fages, Sylvain Soliman
RECOMB
2005
Springer
14 years 10 months ago
Comparative Systems Biology of the Sporulation Initiation Network in Prokaryotes
Many years of experimental and computational molecular biology of model organisms such as Escherichia coli and Saccharomyces cerevisiae has elucidated the gene regulatory network i...
Michiel J. L. de Hoon, Dennis Vitkup
ESAW
2008
Springer
13 years 11 months ago
Engineering Self-modeling Systems: Application to Biology
Complexity of today's systems prevents designers from knowing everything about them and makes engineering them a difficult task for which classical engineering approaches are ...
Carole Bernon, Davy Capera, Jean-Pierre Mano
ICIP
2005
IEEE
14 years 11 months ago
Analyzing symmetry in biological systems
This paper suggests a new measure of symmetry for bifurcating structures, which relies not only on topology and ordering, but also on quantitative properties (e.g. length of branc...
David Milner, Hagit Hel-Or, Daniel Keren, Shmuel R...