60 search results - page 2 / 12 » Biological pathway inference using manifold embedding |
BMCBI
2006
13 years 7 months ago
2006
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
CMSB
2004
Springer
14 years 25 days ago
2004
Springer
In this paper we present a methodology to estimate rates of enzymatic reactions in metabolic pathways. Our methodology is based on applying stochastic logic learning in ensemble le...
BIB
2010
13 years 7 months ago
2010
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
BIBE
2006
IEEE
14 years 1 months ago
2006
IEEE
Microarray experiments produce gene expression data at such a high speed and volume that it is imperative to use highly specialized computational tools for their analyses. One grou...
CMSB
2009
Springer
14 years 2 months ago
2009
Springer
Systems of ordinary differential equations (ODEs) are often used to model the dynamics of complex biological pathways. We construct a discrete state model as a probabilistic appro...