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» Biomedical Text Retrieval System at Korea University
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SIGIR
2003
ACM
14 years 1 months ago
Probabilistic term variant generator for biomedical terms
This paper presents an algorithm to generate possible variants for biomedical terms. The algorithm gives each variant its generation probability representing its plausibility, whi...
Yoshimasa Tsuruoka, Jun-ichi Tsujii
BMCBI
2006
151views more  BMCBI 2006»
13 years 8 months ago
Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues
Background: Word sense disambiguation (WSD) is critical in the biomedical domain for improving the precision of natural language processing (NLP), text mining, and information ret...
Hua Xu, Marianthi Markatou, Rositsa Dimova, Hongfa...
BMCBI
2005
151views more  BMCBI 2005»
13 years 8 months ago
ProMiner: rule-based protein and gene entity recognition
Background: Identification of gene and protein names in biomedical text is a challenging task as the corresponding nomenclature has evolved over time. This has led to multiple syn...
Daniel Hanisch, Katrin Fundel, Heinz-Theodor Mevis...
IWANN
2009
Springer
14 years 3 months ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto
BMCBI
2005
160views more  BMCBI 2005»
13 years 8 months ago
Data-poor categorization and passage retrieval for Gene Ontology Annotation in Swiss-Prot
Background: In the context of the BioCreative competition, where training data were very sparse, we investigated two complementary tasks: 1) given a Swiss-Prot triplet, containing...
Frédéric Ehrler, Antoine Geissbü...