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» Building Large Knowledge Bases in Molecular Biology
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IPPS
1999
IEEE
13 years 11 months ago
Large Scale Simulation of Parallel Molecular Dynamics
This paper aims to describe the implementation of TAKAKAW, an efficient parallel application for the simulation of molecular dynamics designed to handle large proteins in biology....
Pierre-Eric Bernard, Thierry Gautier, Denis Trystr...
SDM
2004
SIAM
211views Data Mining» more  SDM 2004»
13 years 8 months ago
Using Support Vector Machines for Classifying Large Sets of Multi-Represented Objects
Databases are a key technology for molecular biology which is a very data intensive discipline. Since molecular biological databases are rather heterogeneous, unification and data...
Hans-Peter Kriegel, Peer Kröger, Alexey Pryak...
BIOTECHNO
2008
IEEE
14 years 1 months ago
Mathematical Description of Biological Structures and Mechanisms
A new formalism and approach to describing cellular and molecular processes and structures is introduced, designed to support the creation of knowledge bases of molecular and cell...
H. Joel Jeffrey
SEMWEB
2005
Springer
14 years 26 days ago
Ontology Based Analysis of Experimental Data
We address the problem of linking observations from reality to a semantic web based knowledge base. Concepts in the biological domain are increasingly being formalized through ont...
Andrea Splendiani
CORR
2010
Springer
135views Education» more  CORR 2010»
13 years 7 months ago
Optimal Design of a Molecular Recognizer: Molecular Recognition as a Bayesian Signal Detection Problem
Numerous biological functions--such as enzymatic catalysis, the immune response system, and the DNA-protein regulatory network--rely on the ability of molecules to specifically rec...
Yonatan Savir, Tsvi Tlusty