66 search results - page 9 / 14 » Cache-Oblivious Dynamic Programming for Bioinformatics |
CSB
2003
IEEE
14 years 20 days ago
2003
IEEE
The problem addressed by this paper is accurate and automatic gene annotation following precise identification/annotation of exon and intron boundaries of biologically verified ...
ICPP
2003
IEEE
14 years 19 days ago
2003
IEEE
Pairwise sequence alignment is a fundamental operation for homology search in bioinformatics. For two DNA or protein sequences of length ¢ and £ , full-matrix (FM), dynamic prog...
CSB
2005
IEEE
14 years 1 months ago
2005
IEEE
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Lecture Notes
Driven by recent innovations in Field-Programmable Gate Arrays (FPGAs), reconfigurable computing offers unique ways to accelerate key algorithms. FPGAs offer a programmable logic f...
GCB
2009
Springer
14 years 1 months ago
2009
Springer
Abstract: The analysis of RNA folding landscapes yields insights into the kinetic folding behavior not available from classical structure prediction methods. This is especially imp...