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» Case Studies in Model Manipulation for Scientific Computing
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ALMOB
2006
155views more  ALMOB 2006»
15 years 4 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
EOR
2007
101views more  EOR 2007»
15 years 4 months ago
Optimizing an objective function under a bivariate probability model
The motivation of this paper is to obtain an analytical closed form of a quadratic objective function arising from a stochastic decision process with bivariate exponential probabi...
Xavier Brusset, Nico M. Temme
CCGRID
2007
IEEE
15 years 11 months ago
CyberBridges A Model Collaboration Infrastructure for e-Science
The “CyberBridges” pilot project is an innovative model for creating a new generation of scientists and engineers who are capable of fully integrating cyberinfrastructure into...
Heidi L. Alvarez, David C. Chatfield, Donald A. Co...
JSS
2007
86views more  JSS 2007»
15 years 4 months ago
Performance evaluation of UML design with Stochastic Well-formed Nets
The paper presents a method to compute performance metrics (response time, sojourn time, throughput) on Unified Modeling Language design. The method starts with UML design annota...
Simona Bernardi, José Merseguer
SPIN
2012
Springer
13 years 7 months ago
Counterexample Explanation by Anomaly Detection
Since counterexamples generated by model checking tools are only symptoms of faults in the model, a significant amount of manual work is required in order to locate the fault that...
Stefan Leue, Mitra Tabaei Befrouei