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ISMB
2007
13 years 9 months ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
ACMSE
2006
ACM
14 years 24 days ago
Framework design using function generalization: a binary tree traversal case study
A software framework is a technology that enables software reuse, potentially yielding rich dividends but requiring significant longterm investment. However, a framework is not a ...
H. Conrad Cunningham, Yi Liu, Pallavi Tadepalli
BMCBI
2010
138views more  BMCBI 2010»
13 years 7 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
IPPS
2005
IEEE
14 years 13 days ago
A Case Study on Pattern-Based Systems for High Performance Computational Biology
Computational biology research is now faced with the burgeoning number of genome data. The rigorous postprocessing of this data requires an increased role for high performance com...
Weiguo Liu, Bertil Schmidt
EH
1999
IEEE
141views Hardware» more  EH 1999»
13 years 11 months ago
On-Line Evolution of FPGA-Based Circuits: A Case Study on Hash Functions
An evolutionary algorithm is used to evolve a digital circuit which computes a simple hash function mapping a 16bit address space into an 8-bit one. The target technology is FPGA,...
Ernesto Damiani, Andrea Tettamanzi, Valentino Libe...