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CSB
2005
IEEE
110views Bioinformatics» more  CSB 2005»
14 years 20 days ago
A Topological Measurement for Weighted Protein Interaction Network
High-throughput methods for detecting protein-protein interactions (PPI) have given researchers an initial global picture of protein interactions on a genomic scale. The usefulnes...
Pengjun Pei, Aidong Zhang
RECOMB
2005
Springer
14 years 7 months ago
Improved Duplication Models for Proteome Network Evolution
Protein-protein interaction networks, particularly that of the yeast S. Cerevisiae, have recently been studied extensively. These networks seem to satisfy the small world property ...
Gürkan Bebek, Petra Berenbrink, Colin Cooper,...
EJC
2007
13 years 7 months ago
Deterministic random walks on the integers
Jim Propp’s P-machine, also known as the ‘rotor router model’ is a simple deterministic process that simulates a random walk on a graph. Instead of distributing chips to ran...
Joshua N. Cooper, Benjamin Doerr, Joel H. Spencer,...
IM
2007
13 years 7 months ago
Infinite Limits and Adjacency Properties of a Generalized Copying Model
We present a new model for self-organizing networks such as the web graph, and analyze its limit behaviour. In the model, new vertices are introduced over time that copy the neighb...
Anthony Bonato, Jeannette C. M. Janssen
GECCO
2005
Springer
132views Optimization» more  GECCO 2005»
14 years 17 days ago
Takeover time curves in random and small-world structured populations
We present discrete stochastic mathematical models for the growth curves of synchronous and asynchronous evolutionary algorithms with populations structured according to a random ...
Mario Giacobini, Marco Tomassini, Andrea Tettamanz...