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JCPHY
2011
79views more  JCPHY 2011»
13 years 17 days ago
Stochastic Eulerian Lagrangian methods for fluid-structure interactions with thermal fluctuations
A computational approach is introduced for the study of the rheological properties of complex fluids and soft materials. The approach allows for a consistent treatment of microstr...
Paul J. Atzberger
IWCIA
2009
Springer
14 years 4 months ago
Signatures of Combinatorial Maps
Abstract. In this paper, we address the problem of computing a canonical representation of an n-dimensional combinatorial map. To do so, we define two combinatorial map signatures...
Stéphane Gosselin, Guillaume Damiand, Chris...
BMCBI
2010
96views more  BMCBI 2010»
13 years 9 months ago
A statistical framework for differential network analysis from microarray data
Background: It has been long well known that genes do not act alone; rather groups of genes act in consort during a biological process. Consequently, the expression levels of gene...
Ryan Gill, Somnath Datta, Susmita Datta
BMCBI
2008
130views more  BMCBI 2008»
13 years 9 months ago
An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories
Background: Understanding how proteins fold is essential to our quest in discovering how life works at the molecular level. Current computation power enables researchers to produc...
Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yus...
BIOINFORMATICS
2006
118views more  BIOINFORMATICS 2006»
13 years 9 months ago
A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Magnus Rattray, Neil D. Lawrenc...