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» Challenges in Parallel Graph Processing
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BIBM
2009
IEEE
206views Bioinformatics» more  BIBM 2009»
14 years 3 months ago
Application of Kernel Functions for Accurate Similarity Search in Large Chemical Databases
Background: Similaritysearch in chemical structure databases is an important problem with many applications in chemical genomics, drug design, and efficient chemical probe screeni...
Xiaohong Wang, Jun Huan, Aaron M. Smalter, Gerald ...
EDBT
2012
ACM
257views Database» more  EDBT 2012»
11 years 11 months ago
Indexing and mining topological patterns for drug discovery
Increased availability of large repositories of chemical compounds has created new challenges and opportunities for the application of data-mining and indexing techniques to probl...
Sayan Ranu, Ambuj K. Singh
SIGMOD
2010
ACM
196views Database» more  SIGMOD 2010»
14 years 29 days ago
Connected substructure similarity search
Substructure similarity search is to retrieve graphs that approximately contain a given query graph. It has many applications, e.g., detecting similar functions among chemical com...
Haichuan Shang, Xuemin Lin, Ying Zhang, Jeffrey Xu...
PVM
1997
Springer
14 years 1 months ago
Performance of CAP-Specified Linear Algebra Algorithms
The traditional approach to the parallelization of linear algebra algorithms such as matrix multiplication and LU factorization calls for static allocation of matrix blocks to proc...
Marc Mazzariol, Benoit A. Gennart, Vincent Messerl...
SEUS
2009
IEEE
14 years 3 months ago
Concurrency and Communication: Lessons from the SHIM Project
Abstract. Describing parallel hardware and software is difficult, especially in an embedded setting. Five years ago, we started the shim project to address this challenge by develo...
Stephen A. Edwards