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BMCBI
2010
183views more  BMCBI 2010»
13 years 10 months ago
SING: Subgraph search In Non-homogeneous Graphs
Background: Finding the subgraphs of a graph database that are isomorphic to a given query graph has practical applications in several fields, from cheminformatics to image unders...
Raffaele Di Natale, Alfredo Ferro, Rosalba Giugno,...
BMCBI
2008
123views more  BMCBI 2008»
13 years 10 months ago
PocketMatch: A new algorithm to compare binding sites in protein structures
Background: Recognizing similarities and deriving relationships among protein molecules is a fundamental requirement in present-day biology. Similarities can be present at various...
Kalidas Yeturu, Nagasuma Chandra
BMCBI
2010
139views more  BMCBI 2010»
13 years 10 months ago
A global optimization algorithm for protein surface alignment
Background: A relevant problem in drug design is the comparison and recognition of protein binding sites. Binding sites recognition is generally based on geometry often combined w...
Paola Bertolazzi, Concettina Guerra, Giampaolo Liu...
WWW
2006
ACM
14 years 10 months ago
A web-based kernel function for measuring the similarity of short text snippets
Determining the similarity of short text snippets, such as search queries, works poorly with traditional document similarity measures (e.g., cosine), since there are often few, if...
Mehran Sahami, Timothy D. Heilman
SPIRE
2010
Springer
13 years 8 months ago
Hypergeometric Language Model and Zipf-Like Scoring Function for Web Document Similarity Retrieval
The retrieval of similar documents in the Web from a given document is different in many aspects from information retrieval based on queries generated by regular search engine use...
Felipe Bravo-Marquez, Gaston L'Huillier, Sebasti&a...