Sciweavers

983 search results - page 93 / 197
» Circuit Complexity and Multiplicative Complexity of Boolean ...
Sort
View
BMCBI
2008
140views more  BMCBI 2008»
13 years 10 months ago
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
Kazutaka Katoh, Hiroyuki Toh
BMCBI
2006
140views more  BMCBI 2006»
13 years 10 months ago
MACSIMS : multiple alignment of complete sequences information management system
Background: In the post-genomic era, systems-level studies are being performed that seek to explain complex biological systems by integrating diverse resources from fields such as...
Julie D. Thompson, Arnaud Muller, Andrew M. Waterh...
BMCBI
2008
78views more  BMCBI 2008»
13 years 10 months ago
A new protein linear motif benchmark for multiple sequence alignment software
Background: Linear motifs (LMs) are abundant short regulatory sites used for modulating the functions of many eukaryotic proteins. They play important roles in post-translational ...
Emmanuel Perrodou, Claudia Chica, Olivier Poch, To...
BMCBI
2008
123views more  BMCBI 2008»
13 years 10 months ago
A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences
Background: The structure of many eukaryotic cell regulatory proteins is highly modular. They are assembled from globular domains, segments of natively disordered polypeptides and...
Claudia Chica, Alberto Labarga, Cathryn M. Gould, ...
PNPM
1989
14 years 2 months ago
SPNP: Stochastic Petri Net Package
We present SPNP, a powerful GSPN package developed at Duke University. SPNP allows the modeling of complex system behaviors. Advanced constructs are available, such as markingdepe...
Gianfranco Ciardo, Jogesh K. Muppala, Kishor S. Tr...