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» Classes and clusters in data analysis
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IEEEPACT
2006
IEEE
15 years 10 months ago
Complexity-based program phase analysis and classification
Modeling and analysis of program behavior are at the foundation of computer system design and optimization. As computer systems become more adaptive, their efficiency increasingly...
Chang-Burm Cho, Tao Li
BMCBI
2006
102views more  BMCBI 2006»
15 years 4 months ago
Microarray analysis distinguishes differential gene expression patterns from large and small colony Thymidine kinase mutants of
Background: The Thymidine kinase (Tk) mutants generated from the widely used L5178Y mouse lymphoma assay fall into two categories, small colony and large colony. Cells from the la...
Tao Han, Jianyong Wang, Weida Tong, Martha M. Moor...
SP
2008
IEEE
122views Security Privacy» more  SP 2008»
15 years 4 months ago
Large-scale phylogenetic analysis on current HPC architectures
Abstract. Phylogenetic inference is considered a grand challenge in Bioinformatics due to its immense computational requirements. The increasing popularity and availability of larg...
Michael Ott, Jaroslaw Zola, Srinivas Aluru, Andrew...
CCS
2007
ACM
15 years 10 months ago
Polyglot: automatic extraction of protocol message format using dynamic binary analysis
Protocol reverse engineering, the process of extracting the application-level protocol used by an implementation, without access to the protocol specification, is important for m...
Juan Caballero, Heng Yin, Zhenkai Liang, Dawn Xiao...
161
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BMCBI
2010
153views more  BMCBI 2010»
15 years 4 months ago
Pash 3.0: A versatile software package for read mapping and integrative analysis of genomic and epigenomic variation using massi
Background: Massively parallel sequencing readouts of epigenomic assays are enabling integrative genome-wide analyses of genomic and epigenomic variation. Pash 3.0 performs sequen...
Cristian Coarfa, Fuli Yu, Christopher A. Miller, Z...