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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
IPPS
1999
IEEE
13 years 11 months ago
MPIJAVA: An Object-Oriented JAVA Interface to MPI
Abstract. A basic prerequisite for parallel programming is a good communication API. The recent interest in using Java for scienti c and engineering application has led to several ...
Mark Baker, Bryan Carpenter, Geoffrey Fox, Sung Ho...
ICPP
2005
IEEE
14 years 1 months ago
LiMIC: Support for High-Performance MPI Intra-node Communication on Linux Cluster
High performance intra-node communication support for MPI applications is critical for achieving best performance from clusters of SMP workstations. Present day MPI stacks cannot ...
Hyun-Wook Jin, Sayantan Sur, Lei Chai, Dhabaleswar...
BMCBI
2008
204views more  BMCBI 2008»
13 years 7 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
CONCURRENCY
1998
181views more  CONCURRENCY 1998»
13 years 7 months ago
Communication Performance of Java-Based Parallel Virtual Machines
Message passing libraries such as Parallel Virtual Machine PVM and Message Passing Interface MPI provide a common Application Programming Interface API to implement parallel...
Narendar Yalamanchilli, William W. Cohen