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» Closed Set Mining of Biological Data
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SDM
2008
SIAM
125views Data Mining» more  SDM 2008»
13 years 9 months ago
Mining and Ranking Generators of Sequential Patterns
Sequential pattern mining first proposed by Agrawal and Srikant has received intensive research due to its wide range applicability in many real-life domains. Various improvements...
David Lo, Siau-Cheng Khoo, Jinyan Li
BMCBI
2006
166views more  BMCBI 2006»
13 years 7 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2005
152views more  BMCBI 2005»
13 years 7 months ago
GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments
Background: The analysis of biological data is greatly enhanced by existing or emerging databases. Most existing databases, with few exceptions are not designed to easily support ...
S. A. Kirov, X. Peng, E. Baker, D. Schmoyer, B. Zh...
AUSAI
2008
Springer
13 years 9 months ago
Learning to Find Relevant Biological Articles without Negative Training Examples
Classifiers are traditionally learned using sets of positive and negative training examples. However, often a classifier is required, but for training only an incomplete set of pos...
Keith Noto, Milton H. Saier Jr., Charles Elkan
JMLR
2012
11 years 10 months ago
Active Clustering of Biological Sequences
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model...
Konstantin Voevodski, Maria-Florina Balcan, Heiko ...