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BIOINFORMATICS
2007
49views more  BIOINFORMATICS 2007»
13 years 11 months ago
Clustal W and Clustal X version 2.0
M. A. Larkin, Gordon Blackshields, N. P. Brown, R....
ICCSA
2003
Springer
14 years 4 months ago
Parallel CLUSTAL W for PC Clusters
This paper presents a parallel version of CLUSTAL W, called pCLUSTAL. In contrast to the commercial SGI parallel Clustal, which requires an expensive shared memory SGI multiprocess...
James Cheetham, Frank K. H. A. Dehne, Sylvain Pitr...
BMCBI
2010
198views more  BMCBI 2010»
13 years 11 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
ARC
2007
Springer
123views Hardware» more  ARC 2007»
14 years 2 months ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...
IPPS
2006
IEEE
14 years 4 months ago
Parallel implementation and performance characterization of MUSCLE
Multiple sequence alignment is a fundamental and very computationally intensive task in molecular biology. MUSCLE, a new algorithm for creating multiple alignments of protein sequ...
Xi Deng, Eric Li, Jiulong Shan, Wenguang Chen