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BMCBI
2006
144views more  BMCBI 2006»
13 years 7 months ago
Development and implementation of an algorithm for detection of protein complexes in large interaction networks
Background: After complete sequencing of a number of genomes the focus has now turned to proteomics. Advanced proteomics technologies such as two-hybrid assay, mass spectrometry e...
Md. Altaf-Ul-Amin, Yoko Shinbo, Kenji Mihara, Ken ...
NIPS
2004
13 years 9 months ago
Hierarchical Eigensolver for Transition Matrices in Spectral Methods
We show how to build hierarchical, reduced-rank representation for large stochastic matrices and use this representation to design an efficient algorithm for computing the largest...
Chakra Chennubhotla, Allan D. Jepson
BMCBI
2006
159views more  BMCBI 2006»
13 years 7 months ago
EVEREST: automatic identification and classification of protein domains in all protein sequences
Background: Proteins are comprised of one or several building blocks, known as domains. Such domains can be classified into families according to their evolutionary origin. Wherea...
Elon Portugaly, Amir Harel, Nathan Linial, Michal ...
KDD
2008
ACM
135views Data Mining» more  KDD 2008»
14 years 8 months ago
Effective and efficient itemset pattern summarization: regression-based approaches
In this paper, we propose a set of novel regression-based approaches to effectively and efficiently summarize frequent itemset patterns. Specifically, we show that the problem of ...
Ruoming Jin, Muad Abu-Ata, Yang Xiang, Ning Ruan
ICDM
2007
IEEE
159views Data Mining» more  ICDM 2007»
13 years 11 months ago
Spectral Regression: A Unified Approach for Sparse Subspace Learning
Recently the problem of dimensionality reduction (or, subspace learning) has received a lot of interests in many fields of information processing, including data mining, informati...
Deng Cai, Xiaofei He, Jiawei Han