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» Clustering Gene Expression Series with Prior Knowledge
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GCB
2003
Springer
105views Biometrics» more  GCB 2003»
14 years 21 days ago
In silico prediction of UTR repeats using clustered EST data
Clustering of EST data is a method for the non-redundant representation of an organisms transcriptome. During clustering of large amounts of EST data, usually some large clusters ...
Stefan A. Rensing, Daniel Lang, Ralf Reski
TKDE
2010
224views more  TKDE 2010»
13 years 2 months ago
Non-Negative Matrix Factorization for Semisupervised Heterogeneous Data Coclustering
Coclustering heterogeneous data has attracted extensive attention recently due to its high impact on various important applications, such us text mining, image retrieval, and bioin...
Yanhua Chen, Lijun Wang, Ming Dong
BMCBI
2004
131views more  BMCBI 2004»
13 years 7 months ago
Alternative mapping of probes to genes for Affymetrix chips
Background: Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the...
Laurent Gautier, Morten Møller, Lennart Fri...
IDA
2006
Springer
13 years 7 months ago
Backward chaining rule induction
Exploring the vast number of possible feature interactions in domains such as gene expression microarray data is an onerous task. We describe Backward-Chaining Rule Induction (BCR...
Douglas H. Fisher, Mary E. Edgerton, Zhihua Chen, ...
BIBM
2009
IEEE
172views Bioinformatics» more  BIBM 2009»
14 years 18 days ago
Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis
—A comprehensive understanding of cancer progression may shed light on genetic and molecular mechanisms of oncogenesis, and it may provide much needed information for effective d...
Yoon Soo Pyon, Jing Li