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BMCBI
2008
202views more  BMCBI 2008»
15 years 3 months ago
Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
BMCBI
2010
178views more  BMCBI 2010»
15 years 3 months ago
An improved method for scoring protein-protein interactions using semantic similarity within the Gene Ontology
Background: Semantic similarity measures are useful to assess the physiological relevance of protein-protein interactions (PPIs). They quantify similarity between proteins based o...
Shobhit Jain, Gary D. Bader
ICPR
2008
IEEE
16 years 5 months ago
Clustering of short commercial documents for the web
Document clustering techniques have been applied in several areas, with the web as one of the most recent and influent. Both general-purpose and text-oriented techniques exist and...
Elisabetta Binaghi, Ignazio Gallo, Moreno Carullo,...
ICPR
2006
IEEE
16 years 4 months ago
A General Framework for Agglomerative Hierarchical Clustering Algorithms
This paper presents a general framework for agglomerative hierarchical clustering based on graphs. Specifying an inter-cluster similarity measure, a subgraph of the similarity gra...
Reynaldo Gil-García, José Manuel Bad...
ICASSP
2008
IEEE
15 years 10 months ago
Probabilistic framework for gene expression clustering validation based on gene ontology and graph theory
Based on the correlation between expression and ontologydriven gene similarity, we incorporate functional annotations into gene expression clustering validation. A probabilistic f...
Yinyin Yuan, Chang-Tsun Li