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» Clustering gene expression patterns of fly embryos
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KDD
2005
ACM
91views Data Mining» more  KDD 2005»
14 years 7 months ago
On mining cross-graph quasi-cliques
Joint mining of multiple data sets can often discover interesting, novel, and reliable patterns which cannot be obtained solely from any single source. For example, in cross-marke...
Jian Pei, Daxin Jiang, Aidong Zhang
IDA
2006
Springer
13 years 7 months ago
Supporting bi-cluster interpretation in 0/1 data by means of local patterns
Clustering or co-clustering techniques have been proved useful in many application domains. A weakness of these techniques remains the poor support for grouping characterization. ...
Ruggero G. Pensa, Céline Robardet, Jean-Fra...
BMCBI
2008
144views more  BMCBI 2008»
13 years 7 months ago
WGCNA: an R package for weighted correlation network analysis
Background: Correlation networks are increasingly being used in bioinformatics applications. For example, weighted gene co-expression network analysis is a systems biology method ...
Peter Langfelder, Steve Horvath
TCBB
2008
107views more  TCBB 2008»
13 years 7 months ago
Coclustering of Human Cancer Microarrays Using Minimum Sum-Squared Residue Coclustering
It is a consensus in microarray analysis that identifying potential local patterns, characterized by coherent groups of genes and conditions, may shed light on the discovery of pre...
Hyuk Cho, Inderjit S. Dhillon
BMCBI
2005
106views more  BMCBI 2005»
13 years 7 months ago
A multistep bioinformatic approach detects putative regulatory elements in gene promoters
Background: Searching for approximate patterns in large promoter sequences frequently produces an exceedingly high numbers of results. Our aim was to exploit biological knowledge ...
Stefania Bortoluzzi, Alessandro Coppe, Andrea Biso...