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» Clustering of Software Systems Using New Hybrid Algorithms
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BMCBI
2005
87views more  BMCBI 2005»
13 years 9 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
MOBISYS
2007
ACM
14 years 8 months ago
A time-and-value centric provenance model and architecture for medical event streams
Provenance becomes a critical requirement for healthcare IT infrastructures, especially when pervasive biomedical sensors act as a source of raw medical streams for large-scale, a...
Min Wang, Marion Blount, John Davis, Archan Misra,...
BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
14 years 3 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci
COMPGEOM
2006
ACM
14 years 3 months ago
Algorithms for two-box covering
We study the problem of covering a set of points or polyhedra in 3 with two axis-aligned boxes in order to minimize a function of the measures of the two boxes, such as the sum or...
Esther M. Arkin, Gill Barequet, Joseph S. B. Mitch...
KDD
2009
ACM
152views Data Mining» more  KDD 2009»
14 years 9 months ago
TANGENT: a novel, 'Surprise me', recommendation algorithm
Most of recommender systems try to find items that are most relevant to the older choices of a given user. Here we focus on the "surprise me" query: A user may be bored ...
Kensuke Onuma, Hanghang Tong, Christos Faloutsos