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BICOB
2009
Springer
14 years 1 months ago
A Fitness Distance Correlation Measure for Evolutionary Trees
Phylogenetics is concerned with inferring the genealogical relationships between a group of organisms (or taxa), and this relationship is usually expressed as an evolutionary tree....
Hyun Jung Park, Tiffani L. Williams
BMCBI
2008
111views more  BMCBI 2008»
13 years 7 months ago
A perl package and an alignment tool for phylogenetic networks
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
Gabriel Cardona, Francesc Rosselló, Gabriel...
WG
2004
Springer
14 years 11 days ago
Computing Bounded-Degree Phylogenetic Roots of Disconnected Graphs
The Phylogenetic kth Root Problem (PRk) is the problem of finding a (phylogenetic) tree T from a given graph G = (V, E) such that (1) T has no degree-2 internal nodes, (2) the ex...
Zhi-Zhong Chen, Tatsuie Tsukiji
MFCS
2005
Springer
14 years 16 days ago
Reconstructing an Ultrametric Galled Phylogenetic Network from a Distance Matrix
Abstract. Given a distance matrix M that specifies the pairwise evolutionary distances between n species, the phylogenetic tree reconstruction problem asks for an edge-weighted ph...
Ho-Leung Chan, Jesper Jansson, Tak Wah Lam, Siu-Mi...
BMCBI
2005
118views more  BMCBI 2005»
13 years 7 months ago
Vestige: Maximum likelihood phylogenetic footprinting
Background: Phylogenetic footprinting is the identification of functional regions of DNA by their evolutionary conservation. This is achieved by comparing orthologous regions from...
Matthew J. Wakefield, Peter Maxwell, Gavin A. Hutt...