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TC
2010
13 years 6 months ago
Network-on-Chip Hardware Accelerators for Biological Sequence Alignment
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
Souradip Sarkar, Gaurav Ramesh Kulkarni, Partha Pr...
BMCBI
2011
13 years 2 months ago
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars
Background: The prediction of the structure of large RNAs remains a particular challenge in bioinformatics, due to the computational complexity and low levels of accuracy of state...
Zsuzsanna Sukosd, Bjarne Knudsen, Morten Vaerum, J...
KDD
2007
ACM
179views Data Mining» more  KDD 2007»
14 years 1 months ago
Mining statistically important equivalence classes and delta-discriminative emerging patterns
The support-confidence framework is the most common measure used in itemset mining algorithms, for its antimonotonicity that effectively simplifies the search lattice. This com...
Jinyan Li, Guimei Liu, Limsoon Wong
PERCOM
2006
ACM
14 years 7 months ago
Decorrelating wireless sensor network traffic to inhibit traffic analysis attacks
Typical packet traffic in a sensor network reveals pronouncedpatterns that allow an adversary analyzing packet traffic to deduce the location of a base station. Once discovered, t...
Jing Deng, Richard Han, Shivakant Mishra
ICTAI
2009
IEEE
14 years 2 months ago
Preventing Unwanted Social Inferences with Classification Tree Analysis
A serious threat to user privacy in new mobile and web2.0 applications stems from ‘social inferences’. These unwanted inferences are related to the users’ identity, current ...
Sara Motahari, Sotirios G. Ziavras, Quentin Jones