57 search results - page 9 / 12 » Combinatorial Problems on Strings with Applications to Prote... |
BMCBI
2008
13 years 7 months ago
2008
Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
COMPGEOM
2005
ACM
13 years 9 months ago
2005
ACM
We present an efficient algorithm for maintaining the boundary and surface area of protein molecules as they undergo conformational changes. We also describe a robust implementati...
BMCBI
2010
13 years 7 months ago
2010
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
RECOMB
2005
Springer
14 years 7 months ago
2005
Springer
We present a novel computational method, MultiBind, for recognition of binding patterns common to a set of protein structures. It is the first method which performs a multiple alig...
CEC
2010
IEEE
13 years 8 months ago
2010
IEEE
The Nelder-Mead Algorithm (NMA) is an almost half-century old method for numerical optimization, and it is a close relative of Particle Swarm Optimization (PSO) and Differential Ev...