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» Combined Gene Selection Methods for Microarray Data Analysis
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ISNN
2007
Springer
15 years 8 months ago
Memetic Algorithms for Feature Selection on Microarray Data
In this paper, we present two novel memetic algorithms (MAs) for gene selection. Both are synergies of Genetic Algorithm (wrapper methods) and local search methods (filter methods...
Zexuan Zhu, Yew-Soon Ong
BMCBI
2010
167views more  BMCBI 2010»
15 years 2 months ago
Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of met
Background: Currently, a number of bioinformatics methods are available to generate appropriate lists of genes from a microarray experiment. While these lists represent an accurat...
Melissa J. Morine, Jolene McMonagle, Sinead Toomey...
BMCBI
2010
96views more  BMCBI 2010»
15 years 2 months ago
A statistical framework for differential network analysis from microarray data
Background: It has been long well known that genes do not act alone; rather groups of genes act in consort during a biological process. Consequently, the expression levels of gene...
Ryan Gill, Somnath Datta, Susmita Datta
BMCBI
2010
120views more  BMCBI 2010»
15 years 2 months ago
Modeling expression quantitative trait loci in data combining ethnic populations
Background: Combining data from different ethnic populations in a study can increase efficacy of methods designed to identify expression quantitative trait loci (eQTL) compared to...
Ching-Lin Hsiao, Ie-Bin Lian, Ai-Ru Hsieh, Cathy S...
119
Voted
BMCBI
2008
155views more  BMCBI 2008»
15 years 2 months ago
Extending pathways based on gene lists using InterPro domain signatures
Background: High-throughput technologies like functional screens and gene expression analysis produce extended lists of candidate genes. Gene-Set Enrichment Analysis is a commonly...
Florian Hahne, Alexander Mehrle, Dorit Arlt, Annem...