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BMCBI
2005
97views more  BMCBI 2005»
13 years 7 months ago
Comparative mapping of sequence-based and structure-based protein domains
Background: Protein domains have long been an ill-defined concept in biology. They are generally described as autonomous folding units with evolutionary and functional independenc...
Ya Zhang, John-Marc Chandonia, Chris H. Q. Ding, S...
MA
2010
Springer
153views Communications» more  MA 2010»
13 years 5 months ago
Testing quasi-independence for truncation data
Quasi-independence is a common assumption for analyzing truncated data. To verify this condition, we consider a class of weighted log-rank type statistics that include existing te...
Takeshi Emura, Weijing Wang
JACM
2010
120views more  JACM 2010»
13 years 2 months ago
The structure of inverses in schema mappings
A schema mapping is a specification that describes how data structured under one schema (the source schema) is to be transformed into data structured under a different schema (the...
Ronald Fagin, Alan Nash
BMCBI
2008
116views more  BMCBI 2008»
13 years 7 months ago
IgTM: An algorithm to predict transmembrane domains and topology in proteins
Background: Due to their role of receptors or transporters, membrane proteins play a key role in many important biological functions. In our work we used Grammatical Inference (GI...
Piedachu Peris, Damián López, Marcel...
SIGSOFT
2010
ACM
13 years 5 months ago
The missing links: bugs and bug-fix commits
Empirical studies of software defects rely on links between bug databases and program code repositories. This linkage is typically based on bug-fixes identified in developer-enter...
Adrian Bachmann, Christian Bird, Foyzur Rahman, Pr...