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    BMCBI
    2006
    130views more  BMCBI 2006»
    CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
    13 years 9 months ago
    CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
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    Background: The incorporation of statistical models that account for experimental variability provides a necessary framework for the interpretation of microarray data. A robust ex...
    Kevin A. Greer, Matthew R. McReynolds, Heddwen L. ...
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    BMCBI
    2006
    116views more  BMCBI 2006»
    JColorGrid: software for the visualization of biological measurements
    13 years 9 months ago
    JColorGrid: software for the visualization of biological measurements
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    Background: Two-dimensional data colourings are an effective medium by which to represent three-dimensional data in two dimensions. Such "color-grid" representations hav...
    Marcin P. Joachimiak, Jennifer L. Weissman, Barnab...
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    BMCBI
    2006
    172views more  BMCBI 2006»
    BioWarehouse: a bioinformatics database warehouse toolkit
    13 years 9 months ago
    BioWarehouse: a bioinformatics database warehouse toolkit
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    Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
    Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
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    BMCBI
    2006
    152views more  BMCBI 2006»
    A two-stage approach for improved prediction of residue contact maps
    13 years 9 months ago
    A two-stage approach for improved prediction of residue contact maps
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    Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
    Alessandro Vullo, Ian Walsh, Gianluca Pollastri
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    BMCBI
    2006
    111views more  BMCBI 2006»
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
    13 years 9 months ago
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
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    Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
    Tomer Hertz, Chen Yanover
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