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BMCBI
2010
108views more  BMCBI 2010»
13 years 4 months ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
CORR
2010
Springer
110views Education» more  CORR 2010»
13 years 4 months ago
Provenance and evidence in UniProtKB
Abstract. The primary mission of UniProt is to support biological research by maintaining a stable, comprehensive, fully classified, richly and accurately annotated protein sequenc...
Jerven Bolleman, Alain Gateau, Sebastien Gehant, N...
DEBU
2010
138views more  DEBU 2010»
13 years 4 months ago
A Rule-Based Citation System for Structured and Evolving Datasets
We consider the requirements that a citation system must fulfill in order to cite structured and evolving data sets. Such a system must take into account variable granularity, con...
Peter Buneman, Gianmaria Silvello
FCSC
2010
238views more  FCSC 2010»
13 years 4 months ago
Knowledge discovery through directed probabilistic topic models: a survey
Graphical models have become the basic framework for topic based probabilistic modeling. Especially models with latent variables have proved to be effective in capturing hidden str...
Ali Daud, Juanzi Li, Lizhu Zhou, Faqir Muhammad
BMCBI
2010
145views more  BMCBI 2010»
13 years 2 months ago
Directionality in protein fold prediction
Background: Ever since the ground-breaking work of Anfinsen et al. in which a denatured protein was found to refold to its native state, it has been frequently stated by the prote...
Jonathan J. Ellis, Fabien P. E. Huard, Charlotte M...