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BMCBI
2008
96views more  BMCBI 2008»
13 years 10 months ago
Novel methodology for construction and pruning of quasi-median networks
Background: Visualising the evolutionary history of a set of sequences is a challenge for molecular phylogenetics. One approach is to use undirected graphs, such as median network...
Sarah C. Ayling, Terence A. Brown
BMCBI
2008
86views more  BMCBI 2008»
13 years 10 months ago
Subfamily specific conservation profiles for proteins based on n-gram patterns
Background: A new algorithm has been developed for generating conservation profiles that reflect the evolutionary history of the subfamily associated with a query sequence. It is ...
John K. Vries, Xiong Liu
BMCBI
2006
152views more  BMCBI 2006»
13 years 9 months ago
A two-stage approach for improved prediction of residue contact maps
Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
Alessandro Vullo, Ian Walsh, Gianluca Pollastri
CORR
2006
Springer
108views Education» more  CORR 2006»
13 years 9 months ago
Two polygraphic presentations of Petri nets
: This document gives an algebraic and two polygraphic translations of Petri nets, all three providing an easier way to describe reductions and to identify some of them. The first ...
Yves Guiraud
CORR
2011
Springer
151views Education» more  CORR 2011»
13 years 4 months ago
A supervised clustering approach for fMRI-based inference of brain states
We propose a method that combines signals from many brain regions observed in functional Magnetic Resonance Imaging (fMRI) to predict the subject’s behavior during a scanning se...
Vincent Michel, Alexandre Gramfort, Gaël Varo...