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BMCBI
2006
172views more  BMCBI 2006»
13 years 8 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
JAVA
2001
Springer
14 years 1 months ago
Object-based collective communication in Java
CCJ is a communication library that adds MPI-like collective operations to Java. Rather than trying to adhere to the precise MPI syntax, CCJ aims at a clean integration of collect...
Arnold Nelisse, Thilo Kielmann, Henri E. Bal, Jaso...
CIDR
2009
159views Algorithms» more  CIDR 2009»
13 years 9 months ago
RIOT: I/O-Efficient Numerical Computing without SQL
R is a numerical computing environment that is widely popular for statistical data analysis. Like many such environments, R performs poorly for large datasets whose sizes exceed t...
Yi Zhang 0011, Herodotos Herodotou, Jun Yang 0001
POPL
2011
ACM
12 years 11 months ago
Pick your contexts well: understanding object-sensitivity
ensitivity has emerged as an excellent context abstraction for points-to analysis in object-oriented languages. Despite its practical success, however, object-sensitivity is poorl...
Yannis Smaragdakis, Martin Bravenboer, Ondrej Lhot...
ISSTA
2012
ACM
11 years 11 months ago
Static memory leak detection using full-sparse value-flow analysis
We introduce a static detector, Saber, for detecting memory leaks in C programs. Leveraging recent advances on sparse pointer analysis, Saber is the first to use a full-sparse va...
Yulei Sui, Ding Ye, Jingling Xue