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» Comparative modeling without implicit sequence alignments
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BMCBI
2006
85views more  BMCBI 2006»
13 years 8 months ago
On single and multiple models of protein families for the detection of remote sequence relationships
Background: The detection of relationships between a protein sequence of unknown function and a sequence whose function has been characterised enables the transfer of functional a...
James A. Casbon, Mansoor A. S. Saqi
TIP
2008
138views more  TIP 2008»
13 years 8 months ago
Rotation-Invariant Texture Retrieval via Signature Alignment Based on Steerable Sub-Gaussian Modeling
This paper addresses the construction of a novel efficient rotation-invariant texture retrieval method that is based on the alignment in angle of signatures obtained via a steerabl...
George Tzagkarakis, Baltasar Beferull-Lozano, Pana...
JCDL
2006
ACM
176views Education» more  JCDL 2006»
14 years 2 months ago
A hierarchical, HMM-based automatic evaluation of OCR accuracy for a digital library of books
A number of projects are creating searchable digital libraries of printed books. These include the Million Book Project, the Google Book project and similar efforts from Yahoo an...
Shaolei Feng, R. Manmatha
BMCBI
2006
111views more  BMCBI 2006»
13 years 8 months ago
Using ESTs to improve the accuracy of de novo gene prediction
Background: ESTs are a tremendous resource for determining the exon-intron structures of genes, but even extensive EST sequencing tends to leave many exons and genes untouched. Ge...
Chaochun Wei, Michael R. Brent
BMCBI
2004
126views more  BMCBI 2004»
13 years 8 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes