Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
The term grammar-based software describes software whose input can be specified by a context-free grammar. This grammar may occur explicitly in the software, in the form of an in...
Recently, there has been a growth in the amount of machine readable information pertaining to the biomedical field. With this growth comes a desire to be able to extract informati...
Dataflow formalisms have provided designers of digital signal processing systems with optimizations and guarantees to arrive at quality prototypes quickly. As system complexity in...
William Plishker, Nimish Sane, Mary Kiemb, Kapil A...
This paper proposes a method for identifying protein names in biomedical texts with an emphasis on detecting protein name boundaries. We use a probabilistic model which exploits s...