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BMCBI
2011
13 years 2 months ago
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Background: Molecular database search tools need statistical models to assess the significance for the resulting hits. In the classical approach one asks the question how probable...
Stefan Wolfsheimer, Inke Herms, Sven Rahmann, Alex...
ICFCA
2004
Springer
14 years 1 months ago
BLID: An Application of Logical Information Systems to Bioinformatics
BLID (Bio-Logical Intelligent Database) is a bioinformatic system designed to help biologists extract new knowledge from raw genome data by providing high-level facilities for both...
Sébastien Ferré, Ross D. King
IR
2006
13 years 7 months ago
Evolving local and global weighting schemes in information retrieval
This paper describes a method, using Genetic Programming, to automatically determine term weighting schemes for the vector space model. Based on a set of queries and their human de...
Ronan Cummins, Colm O'Riordan
BMCBI
2005
109views more  BMCBI 2005»
13 years 7 months ago
Genome comparison without alignment using shortest unique substrings
Background: Sequence comparison by alignment is a fundamental tool of molecular biology. In this paper we show how a number of sequence comparison tasks, including the detection o...
Bernhard Haubold, Nora Pierstorff, Friedrich M&oum...
CLEF
2005
Springer
14 years 1 months ago
Pitt at CLEF05: Data Fusion for Spoken Document Retrieval
Abstract. This paper describes an investigation of data fusion techniques for spoken document retrieval. The effectiveness of retrievals solely based on the outputs from automatic...
Daqing He, Jae-wook Ahn