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BMCBI
2010
90views more  BMCBI 2010»
13 years 9 months ago
Local alignment of generalized k-base encoded DNA sequence
Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
Nils Homer, Stanley F. Nelson, Barry Merriman
JEA
2006
83views more  JEA 2006»
13 years 8 months ago
Cache-Friendly implementations of transitive closure
In this paper we show cache-friendly implementations of the Floyd-Warshall algorithm for the All-Pairs ShortestPath problem. We first compare the best commercial compiler optimiza...
Michael Penner, Viktor K. Prasanna
MICAI
2010
Springer
13 years 6 months ago
Automatic Image Annotation Using Multiple Grid Segmentation
Abstract. Automatic image annotation refers to the process of automatically labeling an image with a predefined set of keywords. Image annotation is an important step of content-ba...
Gerardo Arellano, Luis Enrique Sucar, Eduardo F. M...
TEC
2010
77views more  TEC 2010»
13 years 3 months ago
On Set-Based Multiobjective Optimization
Abstract--Assuming that evolutionary multiobjective optimization (EMO) mainly deals with set problems, one can identify three core questions in this area of research: (i) how to fo...
Eckart Zitzler, Lothar Thiele, Johannes Bader
SIGMOD
2009
ACM
161views Database» more  SIGMOD 2009»
14 years 3 months ago
Dependency-aware reordering for parallelizing query optimization in multi-core CPUs
The state of the art commercial query optimizers employ cost-based optimization and exploit dynamic programming (DP) to find the optimal query execution plan (QEP) without evalua...
Wook-Shin Han, Jinsoo Lee