Sciweavers

2345 search results - page 35 / 469
» Comparing sequence scaffolds
Sort
View
BIBM
2009
IEEE
113views Bioinformatics» more  BIBM 2009»
13 years 11 months ago
Fast Motif Selection for Biological Sequences
—We consider the problem of identifying motifs, recurring or conserved patterns, in the sets of biological sequences. To solve this task, we present new deterministic and exact a...
Pavel P. Kuksa, Vladimir Pavlovic
ACL
2009
13 years 5 months ago
Semi-Supervised Active Learning for Sequence Labeling
While Active Learning (AL) has already been shown to markedly reduce the annotation efforts for many sequence labeling tasks compared to random selection, AL remains unconcerned a...
Katrin Tomanek, Udo Hahn
ICASSP
2011
IEEE
12 years 11 months ago
Evaluating music sequence models through missing data
Building models of the structure in musical signals raises the question of how to evaluate and compare different modeling approaches. One possibility is to use the model to impute...
Thierry Bertin-Mahieux, Graham Grindlay, Ron J. We...
COCOA
2007
Springer
14 years 1 months ago
A New Dynamic Programming Algorithm for Multiple Sequence Alignment
Abstract. Multiple sequence alignment (MSA) is one of the most basic and central tasks for many studies in modern biology. In this paper, we present a new progressive alignment alg...
Jean-Michel Richer, Vincent Derrien, Jin-Kao Hao
EMNLP
2007
13 years 9 months ago
A Sequence Alignment Model Based on the Averaged Perceptron
We describe a discriminatively trained sequence alignment model based on the averaged perceptron. In common with other approaches to sequence modeling using perceptrons, and in co...
Dayne Freitag, Shahram Khadivi