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IPPS
2009
IEEE
14 years 2 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
ICIP
2008
IEEE
14 years 2 months ago
Model-based compression of nonstationary landmark shape sequences
We have proposed a novel model-based compression technique for nonstationary landmark shape data extracted from video sequences. The main goal is to develop a technique for the co...
Samarjit Das, Namrata Vaswani
IPPS
2006
IEEE
14 years 1 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
ICCV
2005
IEEE
14 years 1 months ago
Integrating the Effects of Motion, Illumination and Structure in Video Sequences
Most work in computer vision has concentrated on studying the individual effects of motion and illumination on a 3D object. In this paper, we present a theory for combining the ef...
Yilei Xu, Amit K. Roy Chowdhury
CIKM
2005
Springer
14 years 1 months ago
Exact match search in sequence data using suffix trees
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...