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CPM
2004
Springer
108views Combinatorics» more  CPM 2004»
14 years 1 months ago
Quadratic Time Algorithms for Finding Common Intervals in Two and More Sequences
A popular approach in comparative genomics is to locate groups or clusters of orthologous genes in multiple genomes and to postulate functional association between the genes contai...
Thomas Schmidt, Jens Stoye
CSB
2003
IEEE
14 years 1 months ago
A New Approach for Gene Annotation Using Unambiguous Sequence Joining
The problem addressed by this paper is accurate and automatic gene annotation following precise identification/annotation of exon and intron boundaries of biologically verified ...
Alexandre Tchourbanov, Daniel Quest, Hesham H. Ali...
BNCOD
2003
91views Database» more  BNCOD 2003»
13 years 9 months ago
Persistent Indexing Technology for Large Sequences
There are two aspects to the work being presented here. The first is a novel persistent index structure for genomic data, a prototype of which has been completed. The second, usin...
Robert Japp
BIB
2008
88views more  BIB 2008»
13 years 7 months ago
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
The Molecular Evolutionary Genetics Analysis (MEGA) software is a desktop application designed for comparative analysis of homologous gene sequences either from multigene families...
Sudhir Kumar, Masatoshi Nei, Joel Dudley, Koichiro...
SIGIR
2010
ACM
13 years 2 months ago
Efficient partial-duplicate detection based on sequence matching
With the ever-increasing growth of the Internet, numerous copies of documents become serious problem for search engine, opinion mining and many other web applications. Since parti...
Qi Zhang, Yue Zhang, Haomin Yu, Xuanjing Huang