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    BMCBI
    2010
    109views more  BMCBI 2010»
    FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
    13 years 9 months ago
    FPGA acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
    Download  www.cse.sc.edu
    Background: Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. Th...
    Stephanie Zierke, Jason D. Bakos
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    FGCS
    2008
    140views more  FGCS 2008»
    Blocking vs. non-blocking coordinated checkpointing for large-scale fault tolerant MPI Protocols
    13 years 9 months ago
    Blocking vs. non-blocking coordinated checkpointing for large-scale fault tolerant MPI Protocols
    Download  www.public.iastate.edu
    A long-term trend in high-performance computing is the increasing number of nodes in parallel computing platforms, which entails a higher failure probability. Fault tolerant progr...
    Darius Buntinas, Camille Coti, Thomas Hérau...
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    IPPS
    2006
    IEEE
    119views Distributed And Parallel Com...» more  IPPS 2006»
    A compiler-based communication analysis approach for multiprocessor systems
    14 years 2 months ago
    A compiler-based communication analysis approach for multiprocessor systems
    Download  www.cs.pitt.edu
    In this paper we describe a compiler framework which can identify communication patterns for MPIbased parallel applications. This has the potential of providing significant perfo...
    Shuyi Shao, Alex K. Jones, Rami G. Melhem
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    CPE
    1998
    Springer
    123views Hardware» more  CPE 1998»
    A Modular and Scalable Simulation Tool for Large Wireless Networks
    14 years 1 months ago
    A Modular and Scalable Simulation Tool for Large Wireless Networks
    Download  nrlweb.cs.ucla.edu
    This paper describes a modular and scalable simulation environment, called GloMoSim, to evaluate end-to-end performance of integrated wired and wireless networks. GloMoSim has been...
    Rajive Bagrodia, Mario Gerla
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    BMCBI
    2008
    111views more  BMCBI 2008»
    Probabilistic base calling of Solexa sequencing data
    13 years 9 months ago
    Probabilistic base calling of Solexa sequencing data
    Download  www.biomedcentral.com
    Background: Solexa/Illumina short-read ultra-high throughput DNA sequencing technology produces millions of short tags (up to 36 bases) by parallel sequencing-by-synthesis of DNA ...
    Jacques Rougemont, Arnaud Amzallag, Christian Isel...
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