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HPDC
1999
IEEE
14 years 1 months ago
The Cactus Computational Toolkit and using Distributed Computing to Collide Neutron Stars
We are developing a system for collaborative research and development for a distributed group of researchers at different institutions around the world. In a new paradigm for coll...
Gabrielle Allen, Tom Goodale, Joan Massó, E...
IPPS
2000
IEEE
14 years 1 months ago
Parallel Computation for Chromosome Reconstruction on a Cluster of Workstations
Reconstructing a physical map of a chromosome from a genomic library presents a central computational problem in genetics. Physical map reconstruction in the presence of errors is...
Suchendra M. Bhandarkar, Salem Machaka, Sanjay She...
JCB
2007
146views more  JCB 2007»
13 years 8 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
PPSC
1997
13 years 10 months ago
Parallel Extensions to the Matrix Template Library
We present the preliminary design for a C++ template library to enable the compositional construction of matrix classes suitable for high performance numerical linear algebra comp...
Andrew Lumsdaine, Brian C. McCandless
BIOINFORMATICS
2004
86views more  BIOINFORMATICS 2004»
13 years 8 months ago
Transposable element annotation of the rice genome
Motivation: The high content of repetitive sequences in the genomes of many higher eukaryotes renders the task of annotating them computationally intensive. Presently, the only wi...
Nikoleta Juretic, Thomas E. Bureau, Richard M. Bru...