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BMCBI
2005
104views more  BMCBI 2005»
15 years 4 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
RECOMB
2010
Springer
15 years 3 months ago
Predicting Nucleosome Positioning Using Multiple Evidence Tracks
Abstract. We describe a probabilistic model, implemented as a dynamic Bayesian network, that can be used to predict nucleosome positioning along a chromosome based on one or more g...
Sheila M. Reynolds, Zhiping Weng, Jeff A. Bilmes, ...
150
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OTM
2007
Springer
15 years 10 months ago
Parallelizing Tableaux-Based Description Logic Reasoning
Practical scalability of Description Logic (DL) reasoning is an important premise for the adoption of OWL in a real-world setting. Many highly efficient optimizations for the DL ta...
Thorsten Liebig, Felix Müller
ECOOP
2005
Springer
15 years 10 months ago
The Role of Design Information in Software Evolution
Software modeling has received a lot a of attention in the last decade and now is an important support for the design process. Actually, the design process is very important to the...
Walter Cazzola, Sonia Pini, Massimo Ancona
GECCO
2010
Springer
191views Optimization» more  GECCO 2010»
15 years 9 months ago
Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of sma
Recent advances in genotyping technology have led to the generation of an enormous quantity of genetic data. Traditional methods of statistical analysis have proved insufficient i...
Emily Rose Holzinger, Carrie C. Buchanan, Scott M....