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BMCBI
2011
13 years 4 months ago
Hierarchical graphs for rule-based modeling of biochemical systems
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
Nathan W. Lemons, Bin Hu, William S. Hlavacek
PROMISE
2010
13 years 4 months ago
Better, faster, and cheaper: what is better software?
Background: Defects are related to failures and they do not have much power for indicating a higher quality or a better system above the baseline that the end-users expect. Nevert...
Burak Turhan, Çetin Meriçli, Tekin M...
PVLDB
2010
116views more  PVLDB 2010»
13 years 4 months ago
Schism: a Workload-Driven Approach to Database Replication and Partitioning
We present Schism, a novel workload-aware approach for database partitioning and replication designed to improve scalability of sharednothing distributed databases. Because distri...
Carlo Curino, Yang Zhang, Evan P. C. Jones, Samuel...
BMCBI
2011
13 years 1 months ago
AMDORAP: Non-targeted metabolic profiling based on high-resolution LC-MS
Background: Liquid chromatography-mass spectrometry (LC-MS) utilizing the high-resolution power of an orbitrap is an important analytical technique for both metabolomics and prote...
Hiroki Takahashi, Takuya Morimoto, Naotake Ogasawa...
CIDR
2011
243views Algorithms» more  CIDR 2011»
13 years 1 months ago
Longitudinal Analytics on Web Archive Data: It's About Time!
Organizations like the Internet Archive have been capturing Web contents over decades, building up huge repositories of time-versioned pages. The timestamp annotations and the she...
Gerhard Weikum, Nikos Ntarmos, Marc Spaniol, Peter...