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    BMCBI
    2006
    100views more  BMCBI 2006»
    Towards a better solution to the shortest common supersequence problem: the deposition and reduction algorithm
    13 years 8 months ago
    Towards a better solution to the shortest common supersequence problem: the deposition and reduction algorithm
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    Background: The problem of finding a Shortest Common Supersequence (SCS) of a set of sequences is an important problem with applications in many areas. It is a key problem in biol...
    Kang Ning, Hon Wai Leong
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    BMCBI
    2006
    158views more  BMCBI 2006»
    Parallelization of multicategory support vector machines (PMC-SVM) for classifying microarray data
    13 years 8 months ago
    Parallelization of multicategory support vector machines (PMC-SVM) for classifying microarray data
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    Background: Multicategory Support Vector Machines (MC-SVM) are powerful classification systems with excellent performance in a variety of data classification problems. Since the p...
    Chaoyang Zhang, Peng Li, Arun Rajendran, Youping D...
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    BMCBI
    2006
    113views more  BMCBI 2006»
    QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyp
    13 years 8 months ago
    QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyp
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    Background: Single nucleotide polymorphisms (SNPs) are important tools in studying complex genetic traits and genome evolution. Computational strategies for SNP discovery make use...
    Jifeng Tang, Ben Vosman, Roeland E. Voorrips, C. G...
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    BMCBI
    2006
    123views more  BMCBI 2006»
    SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology
    13 years 8 months ago
    SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology
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    Background: The biological information in genomic expression data can be understood, and computationally extracted, in the context of systems of interacting molecules. The automat...
    Bruz Marzolf, Eric W. Deutsch, Patrick Moss, David...
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    BMCBI
    2006
    108views more  BMCBI 2006»
    Probe set algorithms: is there a rational best bet?
    13 years 8 months ago
    Probe set algorithms: is there a rational best bet?
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    Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
    Jinwook Seo, Eric P. Hoffman
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