47 search results - page 7 / 10 » Compressed Pattern Matching in DNA Sequences |
ALMOB
2006
13 years 10 months ago
2006
Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
ICDE
2003
IEEE
14 years 11 months ago
2003
IEEE
We present an index structure for managing weightedsequences in large databases. A weighted-sequence is defined as a two-dimensional structure where each element in the sequence i...
GCB
2000
Springer
14 years 1 months ago
2000
Springer
In previous work [10], we considered algorithms related to the statistics of matches with words and regular expressions in texts generated by Bernoulli or Markov sources. In this w...
BMCBI
2008
13 years 10 months ago
2008
Background: Bacterial promoters, which increase the efficiency of gene expression, differ from other promoters by several characteristics. This difference, not yet widely exploite...
FCCM
2011
IEEE
13 years 1 months ago
2011
IEEE
—String matching is a ubiquitous problem that arises in a wide range of applications in computing, e.g., packet routing, intrusion detection, web querying, and genome analysis. D...