Sciweavers

60 search results - page 11 / 12
» Compressing Genomic Sequence Fragments Using SlimGene
Sort
View
BMCBI
2005
142views more  BMCBI 2005»
13 years 7 months ago
CLU: A new algorithm for EST clustering
Background: The continuous flow of EST data remains one of the richest sources for discoveries in modern biology. The first step in EST data mining is usually associated with EST ...
Andrey A. Ptitsyn, Winston Hide
ICASSP
2009
IEEE
14 years 2 months ago
DNA coding using finite-context models and arithmetic coding
The interest in DNA coding has been growing with the availability of extensive genomic databases. Although only two bits are sufficient to encode the four DNA bases, efficient l...
Armando J. Pinho, António J. R. Neves, Carl...
SAC
2008
ACM
13 years 6 months ago
Aggregation languages for moving object and places of interest
We address aggregate queries over GIS data and moving object data, where non-spatial information is stored in a data warehouse. We propose a formal data model and query language t...
Leticia I. Gómez, Bart Kuijpers, Alejandro ...
BMCBI
2008
128views more  BMCBI 2008»
13 years 7 months ago
Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
SODA
2003
ACM
142views Algorithms» more  SODA 2003»
13 years 8 months ago
The similarity metric
—A new class of distances appropriate for measuring similarity relations between sequences, say one type of similarity per distance, is studied. We propose a new “normalized in...
Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vit&...