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» Computability of Models for Sequence Assembly
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BIOCOMP
2006
13 years 10 months ago
Finishing Repetitive Regions Automatically with Dupfinisher
Currently, the genome sequencing community is producing shotgun sequence data at a very high rate, but genome finishing is not keeping pace, even with the help from several automa...
Cliff Han, Patrick Chain
BMCBI
2008
102views more  BMCBI 2008»
13 years 8 months ago
Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs
Background: Ornithine decarboxylase antizymes are proteins which negatively regulate cellular polyamine levels via their affects on polyamine synthesis and cellular uptake. In vir...
Michaël Bekaert, Ivaylo P. Ivanov, John F. At...
ICRA
2009
IEEE
106views Robotics» more  ICRA 2009»
14 years 3 months ago
Stochastic strategies for a swarm robotic assembly system
— We present a decentralized, scalable approach to assembling a group of heterogeneous parts into different products using a swarm of robots. While the assembly plans are predete...
Loic Matthey, Spring Berman, Vijay Kumar
ISBI
2006
IEEE
14 years 9 months ago
Tracking the motion of the outer tips of microtubules
Microtubules play numerous critical roles in a cell such as providing structural tracks for the anchoring and movement of vesicles and chromosomes. Also, the assembly of microtubu...
Stathis Hadjidemetriou, Derek Toomre, James S. Dun...
CPM
2005
Springer
97views Combinatorics» more  CPM 2005»
14 years 2 months ago
On the Complexity of Sparse Exon Assembly
Gene structure prediction is one of the most important problems in computational molecular biology. It involves two steps: the first is finding the evidence (e.g. predicting spl...
Carmel Kent, Gad M. Landau, Michal Ziv-Ukelson