We present practical parallel algorithms using prefix computations for various problems that arise in pairwise comparison of biological sequences. We consider both constant and af...
Background: Co-evolution is the process in which two (or more) sets of orthologs exhibit a similar or correlative pattern of evolution. Co-evolution is a powerful way to learn abo...
The SpiNNaker project aims to develop parallel computer systems with more than a million embedded processors. The goal of the project is to support largescale simulations of syste...
Abstract— Using a neural network-fuzzy logic-genetic algorithm approach we generate an optimal predictor for biological activities of HIV-1 protease potential inhibitory compound...
Razvan Andonie, Levente Fabry-Asztalos, Sarah Abdu...
Finding motifs — patterns of conserved residues — within nucleotide and protein sequences is a key part of understanding function and regulation within biological systems. Thi...